Polygenic risk scores
Our Aim
We aim to generate and make polygenic risk scores (PRS) available for CLS cohorts using a standardised pipeline which is transparent, efficient, and updatable. Our approach to sharing these data seeks to balance the ethical need to make data available to enable research with the ethical need to avoid potential risks.
This will be for multiple health and social traits, and made available on UKDS via special license.
Data availability
Forthcoming / in preparation. We are aiming for this to be delivered by end of 2024 (capacity depending - we are recruiting for a replacement genetics data manager); we will email genetics data applicants when this is available. For further updates please email clsdata@ucl.ac.uk
PRS traits
Domain | Trait | Reference |
---|---|---|
Physical health / anthropometrics | Addictive behaviour/ substance abuse | Hatoum et al. 2023 |
Physical health / anthropometrics | Age at initiation of smoking | Liu et al. 2019 |
Physical health / anthropometrics | Age at menarche | Day et al. 2017 |
Physical health / anthropometrics | Age at menopause | Ruth et al. 2021 |
Physical health / anthropometrics | Asthma | Han et al. 2020 |
Physical health / anthropometrics | Birth weight | Warrington et al. 2019 |
Physical health / anthropometrics | Blood pressure | Keaton et al. 2024 |
Physical health / anthropometrics | Body fat percentage | Roshandel et al. 2023 |
Physical health / anthropometrics | Body Mass Index | Yengo et al. 2018 |
Physical health / anthropometrics | Body Mass Index childhood | Vogelezang et al. 2020 |
Physical health / anthropometrics | Coronary artery disease | Aragam et al. 2022 |
Physical health / anthropometrics | C-reactive protein measurement | Koskeridis et al. 2022 |
Physical health / anthropometrics | Fasting blood glucose measurement | Downie et al. 2022 |
Physical health / anthropometrics | Grip strength measurement | Mullins et al. 2021 |
Physical health / anthropometrics | HbA1c measurement | Sinnott-Armstrong et al. 2021 |
Physical health / anthropometrics | Hypertension | Bi et al. 2020 |
Physical health / anthropometrics | Rheumatoid arthritis | Ishigaki et al. 2022 |
Physical health / anthropometrics | T1 Diabetes | Chiou et al. 2021 |
Physical health / anthropometrics | T2 Diabetes | Suzuki et al. 2024 |
Physical health / anthropometrics | Waist circumference | Christakoudi et al. 2021 |
Mental health and cognition | Anxiety | Forstner et al. 2021 |
Mental health and cognition | ADHD | Demontis et al. 2023 |
Mental health and cognition | Alzheimer’s Disease | Bellenguez et al. 2022 |
Mental health and cognition | Autism spectrum disorder | Grove et al. 2019 |
Mental health and cognition | Bipolar disorder | Mullins et al. 2021 |
Mental health and cognition | Cognition | Savage et al. 2018 |
Mental health and cognition | Hippocampal volume | Liu et al. 2023 |
Mental health and cognition | Major depressive disorder | Howard et al. 2019 |
Mental health and cognition | Parkinson’s disease | Nalls et al. 2019 |
Mental health and cognition | Schizophrenia | Trubetskoy et al. 2022 |
Health/ health behaviours | Alcohol consumption | Liu et al. 2019 |
Health/ health behaviours | Cigarettes per day | Liu et al. 2019 |
Health/ health behaviours | Diet | Cole et al. 2020 |
Health/ health behaviours | Drinks per week | Liu et al. 2019 |
Health/ health behaviours | Smoking | Liu et al. 2019 |
Social outcomes | Education | Okbay et al. 2022 |
Social outcomes | Household Income | Hill et al. 2019 |
Social outcomes | Human Longevity | Pilling et al. 2017 |
Social outcomes | Parental Lifespan | Timmers et al. 2019 |
Personality | Agreeableness | Gupta et al. 2024 |
Personality | Conscientiousness | Gupta et al. 2024 |
Personality | Openness to experience | Gupta et al. 2024 |
Personality | Neuroticism | Gupta et al. 2024 |
Personality | Loneliness | Gupta et al. 2024 |
References
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